

{"id":41,"date":"2024-04-30T10:28:33","date_gmt":"2024-04-30T14:28:33","guid":{"rendered":"https:\/\/sites.temple.edu\/queisser\/?page_id=41"},"modified":"2024-05-09T13:18:47","modified_gmt":"2024-05-09T17:18:47","slug":"neurobox","status":"publish","type":"page","link":"https:\/\/sites.temple.edu\/queisser\/tools\/neurobox\/","title":{"rendered":"NeuroBox"},"content":{"rendered":"\n<h1 class=\"wp-block-heading alignfull has-text-align-center has-color-intro-widgets-text-mod-background-color has-background\">NeuroBox<\/h1>\n\n\n\n<div class=\"wp-block-buttons is-content-justification-center is-layout-flex wp-container-core-buttons-is-layout-a89b3969 wp-block-buttons-is-layout-flex\">\n<div class=\"wp-block-button is-style-outline is-style-outline--1\"><a class=\"wp-block-button__link wp-element-button\" href=\"https:\/\/github.com\/NeuroBox3D\">NeuroBox on github<\/a><\/div>\n<\/div>\n\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity\" \/>\n\n\n\n<div class=\"wp-block-columns alignfull\">\n<div class=\"wp-block-column\">\n<h5 class=\"wp-block-heading has-text-align-right\">Simulate biochemical processes<\/h5>\n\n\n\n<p class=\"has-text-align-right\">Use NeuroBox to simulate biochemical processes in cells. The spatio-temporal dynamics of multiple ion species can be included into one- or three-dimensional computations.<br><em class=\"\">(Image by G. Queisser)<\/em><\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column\"><div class=\"wp-block-image is-style-rounded\">\n<figure class=\"aligncenter size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"701\" src=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/5547436-1400x959-1-1024x701.png\" alt=\"\" class=\"wp-image-286\" style=\"width:299px;height:auto\" srcset=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/5547436-1400x959-1-1024x701.png 1024w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/5547436-1400x959-1-300x206.png 300w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/5547436-1400x959-1-768x526.png 768w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/5547436-1400x959-1.png 1400w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n<\/div><\/div>\n<\/div>\n\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity\" \/>\n\n\n\n<div class=\"wp-block-columns alignfull\">\n<div class=\"wp-block-column\"><div class=\"wp-block-image is-style-rounded\">\n<figure class=\"aligncenter size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"696\" src=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/7865553-1400x952-1-1024x696.png\" alt=\"\" class=\"wp-image-289\" style=\"width:362px;height:auto\" srcset=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/7865553-1400x952-1-1024x696.png 1024w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/7865553-1400x952-1-300x204.png 300w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/7865553-1400x952-1-768x522.png 768w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/7865553-1400x952-1.png 1400w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n<\/div><\/div>\n\n\n\n<div class=\"wp-block-column\">\n<h5 class=\"wp-block-heading\">Electrophysiological simulations<\/h5>\n\n\n\n<p>With NeuroBox you can simulate the electrical behavior of cells, be it in classical Hodgkin-Huxley type fashion on discretized 1D-morphologies, or in full 3D-space using the Poisson-Nernst-Planck equations. Of course, biochemical and electrical processes can be coupled, even across different space dimensions.<br><em class=\"\">(Image by M. Hoffer &amp; G. Queisser)<\/em><\/p>\n<\/div>\n<\/div>\n\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity\" \/>\n\n\n\n<div class=\"wp-block-columns alignfull\">\n<div class=\"wp-block-column\">\n<h5 class=\"wp-block-heading has-text-align-right\">Large library of biological components<\/h5>\n\n\n\n<p class=\"has-text-align-right\">Designed for growth NeuroBox offers an ever growing repertoire of synapse models, ion channels, pumps, organelles etc. Missing components can be easily implemented in a modular way. With the automatic import from existing model databases, extending NeuroBox to specific requirements is straight-forward.<br><em class=\"\">(Image by G. Queisser)<\/em><\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column\"><div class=\"wp-block-image is-style-rounded\">\n<figure class=\"aligncenter size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"850\" src=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/1433343-1400x1162-1-1024x850.png\" alt=\"\" class=\"wp-image-291\" style=\"width:311px;height:auto\" srcset=\"https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/1433343-1400x1162-1-1024x850.png 1024w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/1433343-1400x1162-1-300x249.png 300w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/1433343-1400x1162-1-768x637.png 768w, https:\/\/sites.temple.edu\/queisser\/files\/2024\/05\/1433343-1400x1162-1.png 1400w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n<\/div><\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<div class=\"entry-summary\">\nNeuroBox Simulate biochemical processes Use NeuroBox to simulate biochemical processes in cells. The spatio-temporal dynamics of multiple ion species can be included into one- or three-dimensional computations.(Image by G. Queisser) Electrophysiological simulations With NeuroBox you can simulate the electrical behavior&hellip;\n<\/div>\n<div class=\"link-more\"><a href=\"https:\/\/sites.temple.edu\/queisser\/tools\/neurobox\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &ldquo;NeuroBox&rdquo;<\/span>&hellip;<\/a><\/div>\n","protected":false},"author":35679,"featured_media":0,"parent":11,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"templates\/no-intro.php","meta":{"footnotes":""},"class_list":["post-41","page","type-page","status-publish","hentry","entry"],"_links":{"self":[{"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/pages\/41","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/users\/35679"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/comments?post=41"}],"version-history":[{"count":7,"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/pages\/41\/revisions"}],"predecessor-version":[{"id":294,"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/pages\/41\/revisions\/294"}],"up":[{"embeddable":true,"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/pages\/11"}],"wp:attachment":[{"href":"https:\/\/sites.temple.edu\/queisser\/wp-json\/wp\/v2\/media?parent=41"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}